CDS

Accession Number TCMCG007C20136
gbkey CDS
Protein Id XP_009134057.1
Location complement(join(12985263..12985421,12985501..12985653,12986008..12986112,12986195..12986414,12986484..12986650,12986792..12986966,12987109..12987281,12987359..12987428,12987797..12988272))
Gene LOC103858446
GeneID 103858446
Organism Brassica rapa

Protein

Length 565aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009135809.3
Definition elongator complex protein 3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category BK
Description Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K07739        [VIEW IN KEGG]
EC 2.3.1.48        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000791        [VIEW IN EMBL-EBI]
GO:0002097        [VIEW IN EMBL-EBI]
GO:0002098        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004402        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005719        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006473        [VIEW IN EMBL-EBI]
GO:0006475        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008080        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009292        [VIEW IN EMBL-EBI]
GO:0009294        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009798        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016407        [VIEW IN EMBL-EBI]
GO:0016410        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016573        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016746        [VIEW IN EMBL-EBI]
GO:0016747        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0018393        [VIEW IN EMBL-EBI]
GO:0018394        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033588        [VIEW IN EMBL-EBI]
GO:0034212        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035265        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043543        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044764        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061733        [VIEW IN EMBL-EBI]
GO:0065001        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090708        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1900618        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901371        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905421        [VIEW IN EMBL-EBI]
GO:1905428        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000025        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACGGCGGTAGTGATGAACGGCGAATCGAAAAAGCAGCCACGGCCAGGTCGCGGCGGCTTCCAAGGCCGTGGACTAACGGAGGAAGAAGCTCGAGTTCGCGCCATATCGGAGATCGTGAGCACCATGATCGAGCGCTCCCACCGCAACGAGAACGTGGACCTAAACGCGATTAAAACCCAGGCTTGCCGGAAATACGGCCTAGCGCGAGCGCCGAAGCTAGTGGAGATGATAGCGGCGCTGCCTGATTCGGAGAGAGAGACTCTCCTCCCGAAGCTCCGCGCTAAACCGGTCCGAACCGCTTCAGGAATCGCGGTGGTGGCGGTTATGTCGAAACCGCACAGGTGCCCCCACATAGCGACGACGGGGAATATATGCGTGTATTGTCCAGGTGGACCTGATTCTGACTTCGAGTATAGTACTCAGTCTTACACTGGATATGAGCCTACCAGTATGCGAGCTATTCGTGCCAGGTATAATCCATATGTTCAGGCAAGGAGCAGGATAGACCAGCTGAAGCGGTTGGGTCACAGTGTCGATAAGGTTGAGTTCATTTTGATGGGAGGTACTTTTATGTCACTGCCTGCTGAGTACAGGGATTTCTTCATACGGAACCTTCATGATGCTTTGTCTGGACACACTTCTGCCAATGTTGAAGAAGCTGTTGCTTACTCTGAACATAGTGCAACCAAATGCATTGGCATGACTATTGAAACGAGGCCAGATTACTGTCTTGGACCTCATCTAAGGCAAATGCTGACTTATGGTTGCACCCGACTAGAGATTGGTGTCCAGAGCACATATGAAGATGTTGCCCGTGACACAAATAGAGGTCATACTGTTGCTGCGGTAGCCGACTGCTTCTGCTTGGCTAAAGATGCTGGTTTCAAGGTGGTTGCACATATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGAGACATGGAAAGTTTCAAGGAGTTTTTCGAGAGTCCGTCATTCAGAGCGGATGGGTTAAAAATATATCCTACCCTTGTGATACGTGGAACTGGCCTTTACGAATTATGGAAAACTGGGAGATACCGAAACTATCCACCTGAGCAACTTGTGGATATAGTTGCAAGGATTCTCTCCATGGTGCCTCCATGGACACGTGTTTATAGAGTTCAGCGTGATATTCCTATGCCTCTGGTTACGTCGGGGGTTGAAAAAGGAAATCTCCGTGAGCTGGCTCTGGCAAGAATGGATGATTTGGGCCTTAAATGCCGTGATGTTCGTACTCGCGAAGCTGGAATTCAGGACATTCATCACAAAATCAAGCCAGAACAAGTAGAGCTTGTTCGTCGTGATTACACTGCAAACCAAGGTTGGGAGACATTCCTTTCATATGAAGATACACGCCAGGACATTCTTGTTGGGTTATTACGTTTGCGTAAATGTGGTAAGAACGTAACTTGTCCAGAACTCATGGGAAAGTGTTCTGTTGTCCGTGAGCTTCATGTATATGGAACGGCTGTACCAGTTCATGGTCGGGAGGCTGATAAGTTGCAACATCAGGGGTACGGAACACTTCTGATGGAAGAGGCAGAGAGGATTGCTAGAAGAGAACATCGCTCTAACAAAATCGGTGTGATTTCAGGTGTGGGAACCCGACATTACTACAGAAAGTTGGGTTATGAATTGGAAGGTCCTTACATGGTGAAGCATCTTCTTTGA
Protein:  
MATAVVMNGESKKQPRPGRGGFQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIKTQACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIETRPDYCLGPHLRQMLTYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKPEQVELVRRDYTANQGWETFLSYEDTRQDILVGLLRLRKCGKNVTCPELMGKCSVVRELHVYGTAVPVHGREADKLQHQGYGTLLMEEAERIARREHRSNKIGVISGVGTRHYYRKLGYELEGPYMVKHLL